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Table 5 FBAT-e analyses using setafftrait 1 0 0, testing specifically for affected men

From: ANKHvariants associated with ankylosing spondylitis: gender differences

Marker Allele Allele frequency Number of informative families Z score P
Additive model: biallelic test
   D5S1953 2 0.44 47 0.25 0.805
   rs26307 C 0.80 22 2.06 0.039*
   rs27356 C 0.79 25 2.63 0.008*
   3088132 G 0.79 18 1.23 0.216
   rs153929 A 0.76 36 0.49 0.619
   rs258215 A 0.58 32 0.81 0.419
   rs28006 T 0.26 37 0.15 0.877
   rs25957 C 0.77 33 0.76 0.446
   ANKH-OR 1 0.48 64 1.04 0.297
   D5S1991 2 0.49 64 0.39 0.696
   D5S1954 2 0.36 49 0.33 0.736
Recessive model: biallelic test
   D5S1953 1 0.56 40 -0.83 0.406
   rs26307 C 0.81 25 2.51 0.012*
   rs27356 C 0.80 28 2.99 0.002*
   3088132 G 0.79 22 1.44 0.149
   rs153929 A 0.76 39 0.71 0.477
   rs258215 A 0.59 23 0.60 0.543
   rs28006 T 0.26 16 0.33 0.739
   rs25957 C 0.76 29 0.64 0.518
   ANKH-OR 2 0.52 44 -1.26 0.205
   D5S1991 1 0.51 46 -0.71 0.472
   D5S1954 1 0.64 43 -0.65 0.510
  1. *Statistically significant findings. FBAT, family-based association testing.