Table 3 EASE results for differentially expressed genes identified in hybridization series 1 and 2
From: Variability in synovial inflammation in rheumatoid arthritis investigated by microarray technology
GO ID | GO term | Orthopedic biopsies | Arthroscopic biopsies | ||||
|---|---|---|---|---|---|---|---|
| Â | Â | Rank | Number of hits | EASE score | Rank | Number of hits | EASE score |
GO:0007154 | Cell communication | 1 | 685 | 4.63 Ă— 10-14 | 5 | 273 | 4.72 Ă— 10-6 |
GO:0007155 | Cell adhesion | 2 | 166 | 3.29 Ă— 10-10 | 7 | 72 | 8.51 Ă— 10-6 |
GO:0009607 | Response to biotic stimulus | 4 | 199 | 5.89 Ă— 10-9 | 3 | 90 | 1.30 Ă— 10-6 |
GO:0006952 | Defense response | 5 | 181 | 1.60 Ă— 10-8 | 2 | 84 | 7.69 Ă— 10-7 |
GO:0009605 | Response to external stimulus | 6 | 273 | 3.00 Ă— 10-8 | 1 | 126 | 1.56 Ă— 10-7 |
GO:0006955 | Immune response | 7 | 166 | 1.12 Ă— 10-7 | 4 | 78 | 1.63 Ă— 10-6 |
GO:0007166 | Cell surface receptor linked signal transduction | 9 | 209 | 1.24 Ă— 10-6 | 9 | 95 | 1.77 Ă— 10-5 |
GO:0007160 | Cell-matrix adhesion | 10 | 31 | 2.98 Ă— 10-5 | 121 | 9 | 2.32 Ă— 10-1 |
GO:0009613 | Response to pest/pathogen/parasite | 11 | 107 | 3.66 Ă— 10-5 | 6 | 55 | 6.78 Ă— 10-6 |
GO:0009611 | Response to wounding | 21 | 61 | 1.43 Ă— 10-3 | 8 | 36 | 1.44 Ă— 10-5 |
GO:0006954 | Inflammatory response | 53 | 40 | 1.89 Ă— 10-2 | 10 | 27 | 3.77 Ă— 10-5 |
GO:0007165 | Signal transduction | 3 | 533 | 4.69 Ă— 10-10 | 20 | 204 | 1.77 Ă— 10-3 |
GO:0009987 | Cellular process | 8 | 1,303 | 1.95 Ă— 10-7 | 15 | 519 | 4.28 Ă— 10-4 |