Skip to main content

Table 2 Associated SNPs in the initial genotype analysis

From: A case-control study of rheumatoid arthritis identifies an associated single nucleotide polymorphism in the NCF4 gene, supporting a role for the NADPH-oxidase complex in autoimmunity

SNP id Case/control Genotype Sex P
rs729749 Case CC 0.69 (256) CT 0.26 (95) TT 0.05 (18) Male 0.001
  Control CC 0.57 (141) CT 0.40 (98) TT 0.04 (9)   
rs789181 Case AA 0.81 (244) AG 0.15 (46) GG 0.03 (10) Male 0.03
  Control AA 0.78 (146) AG 0.22 (41) GG 0.005 (1)   
rs1476002 Case CC 0.77 (395) CT 0.22 (115) TT 0.01 (6) Male 0.05
  Control CC 0.76 (229) CT 0.20 (61) TT 0.04 (11)   
  1. SNP, single nucleotide polymorphism. Values indicate the genotype frequencies and number (in brackets).