Skip to main content

Table 2 Associated SNPs in the initial genotype analysis

From: A case-control study of rheumatoid arthritis identifies an associated single nucleotide polymorphism in the NCF4 gene, supporting a role for the NADPH-oxidase complex in autoimmunity

SNP id

Case/control

Genotype

Sex

P

rs729749

Case

CC 0.69 (256)

CT 0.26 (95)

TT 0.05 (18)

Male

0.001

 

Control

CC 0.57 (141)

CT 0.40 (98)

TT 0.04 (9)

  

rs789181

Case

AA 0.81 (244)

AG 0.15 (46)

GG 0.03 (10)

Male

0.03

 

Control

AA 0.78 (146)

AG 0.22 (41)

GG 0.005 (1)

  

rs1476002

Case

CC 0.77 (395)

CT 0.22 (115)

TT 0.01 (6)

Male

0.05

 

Control

CC 0.76 (229)

CT 0.20 (61)

TT 0.04 (11)

  
  1. SNP, single nucleotide polymorphism. Values indicate the genotype frequencies and number (in brackets).