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Table 2 GenBank accession numbers and primer sequences

From: Microarray gene expression profiling of osteoarthritic bone suggests altered bone remodelling, WNT and transforming growth factor-β/bone morphogenic protein signalling

Gene/primer (GenBank accession number)

Forward

Reverse

GAPDH (NM_002046)

ACCCAGAAGACTGTGGATGG

CAGTGAGCTTCCCGTTCAG

ADAMTS4 (NM_005099)

GGCTACTACTATGTGCTGGAGC

TCCGCACACCATGCACTTGTCA

ADM (NM_001124)

GGATGAAGCTGGTTTCCGTC

GACTCAGAGCCCACTTATTC

ADFP (NM_001122)

GTTGCCAATACCTATGCCTG

CAGTAGTCGTCACAGCATCT

CD14 (NM_000591)

GAGGTTCGGAAGACTTATCG

ATCTTCATCGTCCAGCTCAC

COL4A1 (NM_001845)

TAGAGAGGAGCGAGATGTTC

GTGACATTAGCTGAGTCAGG

CTNNB1 (NM_001904)

GGTGCTATCTGTCTGCTCTAGT

GACGTTGACTTGGATCTGTCAGG

FST (NM_006350)

GGCAAGATGTAAAGAGCAGC

CATTATTGGTCTGGTCCACC

GADD45B (NM_015675)

TTGCAACATGACGCTGGAAG

CATTCATCAACTTGGCCGAC

IBSP (NM_004967)

CAATCCAGCTTCCCAAGAAG

CTTCTGCTTCGCTTTCTTCG

INHBA (NM_002192)

GAACTTATGGAGCAGACCTC

TGCCTTCCTTGGAAATCTCG

INSIG1 (NM_005542)

TGTATCGACAGTCACCTCGGA

GGACAGCTGGACATTATTGGC

ITGB2 (NM_000211))

AAGTGACGCTTTACCTGCGA

CCTGAGGTCATCAAGCATGG

KLF6 (NM_001300)

TGTGCAGCATCTTCCAGGAG

AACGTTCCAGCTCTAGGCAG

MEPE (NM_020203)

GCAAAGCTGTGTGGAAGAGCAGA

CCCTTATTCTCACTGGCTTCAG

MMP25 (NM_004142)

ATGTCACCGTCAGCAACGCA

CGGTCTTGATGCTGTTCTTG

MT2A (NM_005953)

GCAAATGCACCTCCTGCAAG

GTGGAAGTCGCGTTCTTTAC

NHERF1 (NM_004252)

TCACCAATGGGGAGATACAG

GTCTTGGGAATTCAGCTCCT

PTEN (NM_000314)

AAGACAAAGCCAACCGATAC

GAAGTTGAACTGCTAGCCTC

RUNX2 (NM_004348)

TGATGACACTGCCACCTCTG

GGGATGAAATGCTTGGGAAC

S100A4 (NM_002961)

GTCAGAACTAAAGGAGCTGC

TGTTGCTGTCCAAGTTGCTC

SMAD3 (NM_005902)

TTCAACAACCAGGAGTTCGC

TACTGGTCACAGTA

STC1 (NM_003155)

CCTGTGACACAGATGGGATG

GAATGGCGAGGAAGACCTTG

TIMP4 (NM_003256)

TTGACTGGTCAGGTCCTCAGT

GGTACTGTGTAGCAGGTGGT

TWIST1 (NM_000474)

TCAGCAGGGCCGGAGACCTAGAT

GTCTGGGAATCACTGTCCAC

WNT5B (AY009399)

ACCCTACTCTGGAAACTGTC

TAAACATCTCGGGTCTCTGC

  1. 'Slide' indicates the microarray slide comparison. Slides 1 to 10 are control (CTL)-osteoarthritis (OA) female sample pairs, slides 11 to 20 are CTL-OA male sample pairs, slides 21 to 30 are OA-osteoporosis (OP) female sample pairs and slides 32 to 40 are CTL-OP female sample pairs. GEO, Gene Expression Omnibus; ID, individual/sample.