|
1
|
38
|
9 × Escherichia coli, 5 × Propionibacterium acnes, 4 × Stenotrophomonas maltophilia, 3 × γ proteobacterium, 2 × Afipia genosp, 2 × Escherichia spp., 2 × swine manure bacterium, 2 × uncultured β proteobacterium, 2 × uncultured candidate division OP10 bacterium, 1 × Alcaligenes faecalis, 1 × α proteobacterium, 1 × Brevundimonas diminuta, 1 × Pseudomonas sp., 1 × Ralstonia sp., 1 × Shigella sp., 1 × Sphingomonas sp.
|
|
2
|
36
|
14 × Escherichia coli, 5 × Bradyrhizobium elkanii, 4 × swine manure bacterium, 3 × Sphingomonas asaccharolytica, 2 × Pseudomonas poae, 2 × Ralstonia spp., 2 × uncultured Flavobacterium spp., 2 × uncultured Sphingobacterium spp., 1 × Flavobacterium mizutaii, 1 × Pseudomonas sp.
|
|
3
|
50
|
8 × Alcaligenes faecalis, 7 × γ proteobacterium, 7 × Stenotrophomonas maltophilia, 6 × Rhodococcus spp., 6 × swine manure bacterium, 5 × Shigella sonnei, 5 × Propionibacterium acnes, 4 × unclassified proteobacteria, 2 × Serratia proteamaculans
|
|
4
|
48
|
25 × Aquabacterium commune, 4 × Afipia genosp, 4 × swine manure bacterium, 2 × Escherichia spp., 2 × γ proteobacterium, 2 × Propionibacterium acnes, 2 × Stenotrophomonas maltophilia, 1 × Acinetobacter baumannii, 1 × α proteobacterium, 1 × Flavobacterium mizutaii, 1 × Ralstonia sp., 1 × Shigella flexneri, 1 × Variovorax sp., 1 × uncultured candidate division OP10 bacterium
|
|
5
|
26
|
6 × Aquabacterium commune, 6 × γ proteobacterium, 3 × Afipia genosp, 2 × Propionibacterium acnes, 2 × Ralstonia spp., 2 × swine manure bacterium, 1 × Shigella flexneri, 1 × Shigella sp., 1 × Staphylococcus haemolyticus, 1 × Stenotrophomonas maltophilia, 1 × uncultured eubacterium
|
|
6
|
24
|
10 × Escherichia coli, 3 × γ proteobacterium, 2 × Leucobacter luti, 2 × Staphylococcus spp., 2 × swine manure bacterium, 2 × uncultured candidate division OP10 bacterium, 1 × Ralstonia sp., 1 × Stenotrophomonas maltophilia, 1 × uncultured Sphingobacterium sp.
|
|
UA
| | |
|
7
|
48
|
7 × Stenotrophomonas maltophilia, 6 × swine manure bacterium, 4 × Rhodococcus spp., 4 × Staphylococcus spp., 4 × Streptococcus infantis, 3 × Propionibacterium acnes, 3 × Bosea vestrisii, 2 × Afipia genosp, 2 × Blastococcus spp., 2 × Leptotrichia spp., 1 × Aeromonas sp., 1 × Actinomyces sp., 1 × Corynebacterium durum, 1 × Kingella oralis, 1 × Microbacterium oxydans, 1 × Neisseria flava, 1 × Pirellula sp., 1 × Shigella sp., 1 × Staphylococcus aureus, 1 × Streptococcus mitis, 1 × Streptococcus sanguinis
|
|
8
|
41
|
13 × Escherichia coli, 6 × Bradyrhizobium elkanii, 5 × Sphingomonas spp., 4 × γ proteobacterium, 3 × Enterobacter hormaechei, 3 × Stenotrophomonas maltophilia, 2 × Corynebacterium tuberculostearicum, 1 × Enterococcus cecorum, 1 × Flavobacterium mizutaii, 1 × γ proteobacterium, 1 × uncultured soil bacterium, 1 × uncultured Sphingobacterium sp.
|
|
9
|
42
|
11 × Escherichia coli, 7 × uncultured Sphingobacterium spp., 4 × Flavobacterium mizutaii, 6 × uncultured Flavobacterium spp., 3 × γ proteobacterium, 2 × Corynebacterium, tuberculostearicum, 2 × Ralstonia spp., 2 × Stenotrophomonas maltophilia, 1 × Paracoccus yeei, 1 × Pseudomonas poae, 1 × Shigella sonnei, 1 × Streptococcus mitis, 1 × manganese-oxidizing bacterium
|
|
10
|
25
|
10 × Escherichia coli, 3 × uncultured Flavobacterium spp., 2 × uncultured Sphingobacterium spp., 2 × Bacteroidetes bacterium, 2 × Flavobacterium mizutaii, 1 × Oxalobacter sp., 1 × Shigella flexneri, 1 × Shigella sp., 1 × Stenotrophomonas maltophilia, 1 × uncultured α proteobacterium, 1 × uncultured candidate division OP10 bacterium
|
|
11
|
46
|
9 × Escherichia coli, 5 × Acinetobacter spp., 5 × Stenotrophomonas maltophilia, 5 × uncultured γ proteobacterium, 3 × uncultured Sphingobacterium spp., 3 × Pseudomonas spp., 2 × Flavobacterium mizutaii, 2 × Propionibacterium acnes, 2 × swine manure bacterium 37–8, 2 × uncultured Flavobacterium spp., 1 × Aeromonas sp., 1 × Caulobacter endosymbiont of Tetranychus urticae, 1 × Acinetobacter schindleri, 1 × manganese-oxidizing bacterium, 1 × γ proteobacterium, 1 × uncultured Sphingobacterium sp., 1 × unclassified proteobacterium, 1 × uncultured candidate division OP10 bacterium
|
|
12
|
34
|
13 × Escherichia coli, 4 × Corynebacterium coyleae, 3 × Sphingomonas spp., 2 × γ proteobacterium, 2 × Ralstonia spp., 2 × Shigella spp., 2 × swine manure bacterium, 2 × uncultured Sphingobacterium spp., 1 × Flavobacterium mizutaii, 1 × Klebsiella sp., 1 × Propionibacterium acnes, 1 × unclassified enterobacteria
|
|
13
|
42
|
18 × Escherichia coli, 4 × uncultured Sphingobacterium spp., 3 × Stenotrophomonas maltophilia, 2 × Aeromonas spp., 2 × Flavobacterium mizutaii, 2 × gamma proteobacterium, 2 × Ralstonia spp., 2 × uncultured candidate division OP10 bacterium, 1 × Alcaligenes faecalis, 1 × Acinetobacter sp., 1 × Halomonas sp., 1 × Stenotrophomonas sp., 1 × swine manure bacterium, 1 × Sphingomonas sp., 1 × uncultured Flavobacterium sp.
|
|
14
|
28
|
8 × Escherichia coli, 2 × Bradyrhizobium japonicum, 2 × γ proteobacterium, 2 × α proteobacterium, 2 × Stenotrophomonas maltophilia, 2 × Sphingomonas spp., 2 × Corynebacterium durum, 1 × Achromobacter xylosoxidans, 1 × Bacteroidetes bacterium, 1 × β proteobacterium, 1 × Bradyrhizobium elkanii, 1 × Novosphingobium spp., 1 × Paracoccus spp., 1 × unclassified Rhodocyclaceae, 1 × uncultured Sphingobacterium sp.
|
|
15
|
49
|
17 × Escherichia coli, 5 × Shigella spp., 4 × Stenotrophomonas maltophilia, 4 × unclassified Rhodocyclaceae, 3 × swine manure bacterium, 3 × uncultured candidate division OP10 bacterium, 2 × uncultured Sphingobacterium spp., 2 × uncultured Sphingobacterium spp., 2 × Rhodococcus spp., 1 × Alcaligenes sp., 1 × α proteobacterium, 1 × Bradyrhizobium japonicum, 1 × Ralstonia sp., 1 × Flavobacterium mizutaii, 1 × γ proteobacterium, 1 × Pedomicrobium australicum
|
|
RA
| | |
|
16
|
40
|
15 × Escherichia coli, 5 × swine manure bacterium, 4 × Ralstonia spp., 3 × uncultured Flavobacterium spp., 2 × Acinetobacter spp., 2 × Antarctic bacterium, 2 × Flavobacterium mizutaii, 1 × Actinomyces naeslundii, 1 × Alcaligenes faecalis, 1 × Bacteroidetes bacterium, 1 × Caulobacter sp., 1 × Corynebacterium aurimucosum, 1 × Shigella sp., 1 × uncultured α proteobacterium
|
|
17
|
35
|
6 × Escherichia coli, 5 × Shigella spp., 4 × Bradyrhizobium elkanii, 4 × uncultured Sphingobacterium spp., 3 × Ralstonia spp., 3 × uncultured Flavobacterium spp., 2 × γ proteobacterium, 2 × swine manure bacterium, 1 × Alcaligenes sp., 1 × Caulobacter sp., 1 × Pseudomonas sp., 1 × Rhodococcus fascians, 1 × Serratia proteamaculans, 1 × Streptococcus thermophilus
|
|
18
|
11
|
7 × Escherichia coli, 2 × Stenotrophomonas maltophilia, 1 × γ proteobacterium, 1 × Ralstonia sp.,
|
|
OA
| | |
|
19
|
31
|
7 × Escherichia coli, 7 × swine manure bacterium, 5 × Alcaligenes faecalis, 4 × Pseudomonas poae, 3 × Bradyrhizobium elkanii, 2 × Stenotrophomonas maltophilia, 1 × Caulobacter leidyia, 1 × Curvibacter gracilis, 1 × γ proteobacterium
|
|
20
|
18
|
7 × Escherichia coli, 7 × uncultured Flavobacterium spp., 2 × uncultured Sphingobacterium spp., 1 × uncultured delta proteobacterium, 1 × Shigella sp.
|
|
21
|
5
|
2 × Alcaligenes spp., 1 × Achromobacter xylosoxidans, 2 × Brucellaceae bacterium
|
