Cia5dregulates a new fibroblast-like synoviocyte invasion-associated gene expression signature

Table 1 Genes studied with QPCR for confirmatory studies, primers and probe sequences

Accession number	Gene symbol	Target exon^b	Probe	Forward primer	Reverse primer
Up-regulated in DA
NM_139089.1	Cxcl10	4	Exiqon Universal probe 67	TTCGGACCAGCTCTTAGAGAA	GCCTGGTCCTGAGACAAAAG
XM_220552.3	Trim16	6	Exiqon Universal probe 1	GTGAACTCCTTCCCACTCCA	CAGCTGCATTTCTGGAAACA
NM_017207.1	Trpv2	15	Exiqon Universal probe 6	CTCTTCCCACCTTATCTGAGGA	GACCTGAAGGGGCAGATG
NM_019357.1	Vil2	13	CCCCAAGACCCAGTGGAATCCTCC^a	AGGTACCGGGCGATGTTCT	GGCCTGTTTGGCACTATGTGA
LOC309362	Dnmbp	16	Exiqon Universal probe 97	TTGTCTCAGCATGGGTCCTA	ACCAGGATTTTAAGGCCACA
NM_001107408	Gins3	3–4	Exiqon Universal probe 17	GTCGTGGACCTCCACAAAAT	GAACCGTCCAATAAAAGTCTGC
Down-regulated in DA
XM_235434.4	Gsdmdc1	13	Exiqon Universal probe 68	AGCACGTCTTGGAACAGAGC	TCCTCATCCCAGCTGTCC
XM_222868.4	Olfml2b	8	Exiqon Universal probe 106	CTCCCTTCTTCCATGCTCTG	GCAAGCCCCAGAGGAATAA
NM_001008321.1	Gadd45b	4	Exiqon Universal probe 25	ACAGGTGGTCGCCAAGAC	CCAGGCCTTGGCTCTAAAGT
Estrogen receptors
NM_012689.1	Esr1	-	Exiqon Universal probe 67	GCAAGAATGTCGTGCCTCTC	TGAAGACGATGAGCATCCAG
NM_012754	Esr2	-	Exiqon Universal probe 94	CCTTGAAGGCTCTCGGTGTA	CAGAACCTTTCAGATGTTTCCA

ISSN: 1478-6362