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Table 1 Genes proposed to influence SLE risk [1, 2]

From: Developments in the scientific understanding of lupus

Candidate gene

Chromosomal location

Proposed function

PTPN22

1p13

T cell activation

FCGR-2A, FCGR-2B, FCGR-3A, FCGR-3B

1q23-25

Fc receptors; clearance of immune complexes

TNFSF-4

1p36

TNFα expression

STAT-4

2q32

T cell cytokine production and macrophage response to IFN-α

CTLA-4

2q33

T cell activation

PDCD-1

2q37

Lymphocyte differentiation

PXK

3p14

Unknown

HLA-DR2, HLA-DR3

6p11-p21

Antigen presentation

IRF-5

7q32

Expression of IFN-α

BLK-C8orf13

8p23

B cell development and function

MBL-2

10q11

Antigen presentation and immune complex clearance

KIAA1542

11p15

Interferon alpha expression?

ITGAM

16p11

Adherence of neutrophils and monocytes to endothelium

  1. BLK = B lymphocyte tyrosine kinase; CTLA = cytotoxic T-lymphocyte associated; FCGR = Fc gamma receptor; HLA = human leukocyte antigen; IFN = interferon; IRF = interferon regulatory factor; ITGAM = integrin alpha(M); MBL = mannose binding lectin; PDCD = programmed cell death; PTPN = protein tyrosine phosphatase nonreceptor; SLE = systemic lupus erythematosus; STAT = signal transducer and activator of transcription; TNF = tumor necrosis factor; TNFSF = tumor necrosis factor ligand superfamily.