From: In vitromodel for the analysis of synovial fibroblast-mediated degradation of intact cartilage
Gene | Primer forward | Primer reverse | Accession number | T annealing | Melting T product |
---|---|---|---|---|---|
Human/bovine Aldolase A | 5'-TCATCCTCTTCCATGAGACACTCTA-3' | 5'ATTCTGCTGGCAGATACTGGCATAA-3' | [GenBank: NM_000034] | 58°C | 88°C |
Human MMP-1 | 5'-GACCTGGAGGAAATCTTGC-3' | 5'-GTTAGCTTACTGTCACACGC-3' | [GenBank: NM_002421] | 58°C | 86°C |
Human MMP-3 | 5'-CTCACAGACCTGACTCGGTT-3' | 5'-CACGCCTGAAGGAAGAGATG-3' | [GenBank: NM_002422] | 58°C | 81°C |
Human IL-6 | 5'-ATGAACTCCTTCTCCACAAGCG-3' | 5'-CTCCTTTCTCAGGGCTGAG-3' | [GenBank: NM_000600] | 60°C | 86°C |
Human IL-8 | 5'-GCCAAGAGAATATCCGAACT-3' | 5'-AGGCACAGTGGAACAAGGACTTGT-3' | [GenBank: NM_000584] | 60°C | 78°C |
Bovine MMP-1 | 5'-CAAGAGCAGATGTGGACCAA-3' | 5'-CTGGTTGAAAAGCATGAGCA-3' | [GenBank: NM_174112] | 61°C | 83°C |
Bovine MMP-3 | 5'-CTGGTGTCCAGAAGGTGGAT-3' | 5'-TAGGCGCCCTTGAAGAAGTA-3' | [GenBank: AB043995] | 61°C | 83°C |
Bovine IL-6 | 5'-ATGAACTCCCGCTTCACAAG-3' | 5'-CCTTGCTGCTTTCACACTCA-3' | [GenBank: NM_173923] | 61°C | 83°C |
Bovine IL-8 | 5'-TGCTCTCTGCAGCTCTGTGT-3' | 5'-CAGACCTCGTTTCCATTGGT-3' | [GenBank: NM_173925] | 64°C | 81°C |
Bovine Col II (α 1 chain) | 5'-CATCTGGTTTGGAGAAACCATC-3' | 5'-GCCCAGTTCAGGTCTCTTAG-3' | [GenBank: NM_001001135] | 61°C | 83°C |
Bovine COMP | 5'-ATGCGGACAAGGTGGTAGAC-3' | 5'-TCTCCATACCCTGGTTGAGC-3' | [GenBank: X74326] | 61°C | 87°C |