Table 3 Allele frequencies of the 12 tagSNPs from the intergenic 6q23 region: cases versus controls
SNP | MAF% (n/N) | OR (95% CI) | P |
|---|---|---|---|
rs566097 | |||
Cases | 11.4 (364/3,198) | 0.99 (0.8 to 1.1) | NS |
Controls | 11.5 (367/3,182) | ||
rs13207033 | |||
Cases | 29.3 (897/3,062) | 0.98 (0.9 to 1.1) | NS |
Controls | 29.7 (914/3,082) | ||
rs489738 | |||
Cases | 17.7 (559/3,164) | 0.94 (0.8 to 1.1) | NS |
Controls | 18.6 (586/3,158) | ||
rs12194935 | |||
Cases | 23.0 (726/3,160) | 1.00 (0.9 to 1.1) | NS |
Controls | 23.0 (726/3,154) | ||
rs536331 | |||
Cases | 42.1 (1,345/3,194) | 0.99 (0.9 to 1.1) | NS |
Controls | 42.5 (1,351/3,182) | ||
rs675520 | |||
Cases | 48.6 (1,507/3,104) | 0.96 (0.9 to 1.1) | NS |
Controls | 49.5 (1,520/3,070) | ||
rs6920220 | |||
Cases | 22.0 (703/3,200) | 1.12 (1.0 to 1.3) | 0.07 |
Controls | 20.1 (639/3,178) | ||
rs694069 | |||
Cases | 39.0 (1,244/3,188) | 0.96 (0.9 to 1.1) | NS |
Controls | 40.0 (1,273/3,180) | ||
rs6917441 | |||
Cases | 24.9 (790/3,178) | 0.95 (0.9 to 1.1) | NS |
Controls | 25.8 (816/3,164) | ||
rs647108 | |||
Cases | 39.7 (1,265/3,188) | 0.95 (0.9 to 1.0) | NS |
Controls | 40.9 (1,301/3,178) | ||
rs9321627 | |||
Cases | 22.7 (728/3,202) | 0.96 (0.9 to 1.1) | NS |
Controls | 23.5 (749/3,186) | ||
rs609438 | |||
Cases | 45.1 (1,436/3,182) | 0.91 (0.8 to 1.0) | 0.047 |
Controls | 47.6 (1,513/3,178) |