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Table 3 Allele frequencies of the 12 tagSNPs from the intergenic 6q23 region: cases versus controls

From: Analysis of TNFAIP3, a feedback inhibitor of nuclear factor-κB and the neighbor intergenic 6q23 region in rheumatoid arthritis susceptibility

SNP MAF% (n/N) OR (95% CI) P
rs566097    
   Cases 11.4 (364/3,198) 0.99 (0.8 to 1.1) NS
   Controls 11.5 (367/3,182)   
rs13207033    
   Cases 29.3 (897/3,062) 0.98 (0.9 to 1.1) NS
   Controls 29.7 (914/3,082)   
rs489738    
   Cases 17.7 (559/3,164) 0.94 (0.8 to 1.1) NS
   Controls 18.6 (586/3,158)   
rs12194935    
   Cases 23.0 (726/3,160) 1.00 (0.9 to 1.1) NS
   Controls 23.0 (726/3,154)   
rs536331    
   Cases 42.1 (1,345/3,194) 0.99 (0.9 to 1.1) NS
   Controls 42.5 (1,351/3,182)   
rs675520    
   Cases 48.6 (1,507/3,104) 0.96 (0.9 to 1.1) NS
   Controls 49.5 (1,520/3,070)   
rs6920220    
   Cases 22.0 (703/3,200) 1.12 (1.0 to 1.3) 0.07
   Controls 20.1 (639/3,178)   
rs694069    
   Cases 39.0 (1,244/3,188) 0.96 (0.9 to 1.1) NS
   Controls 40.0 (1,273/3,180)   
rs6917441    
   Cases 24.9 (790/3,178) 0.95 (0.9 to 1.1) NS
   Controls 25.8 (816/3,164)   
rs647108    
   Cases 39.7 (1,265/3,188) 0.95 (0.9 to 1.0) NS
   Controls 40.9 (1,301/3,178)   
rs9321627    
   Cases 22.7 (728/3,202) 0.96 (0.9 to 1.1) NS
   Controls 23.5 (749/3,186)   
rs609438    
   Cases 45.1 (1,436/3,182) 0.91 (0.8 to 1.0) 0.047
   Controls 47.6 (1,513/3,178)   
  1. Shown are the allele frequencies of the 12 tag-single nucleotide polymorphisms (SNPs) from the intergenic 6q23 region in patients with rheumatoid arthritis (cases) and control individuals (controls). MAF, minor allele frequency; n, number of minor alleles; N, total number of alleles.