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Table 4 SNP characteristics in RA-OA case-control sample

From: Association of common polymorphisms in known susceptibility genes with rheumatoid arthritis in a Slovak population using osteoarthritis patients as controls

  RA case genotypes RA-free OA control genotypes
SNP 11 12 22 MAF P (HWE) 11 12 22 MAF P (HWE)
rs2476601 356 144 14 0.167 1 239 61 2 0.108 0.551
rs7574865 259 205 54 0.302 0.175 196 87 17 0.202 0.104
rs10499194 281 200 37 0.264 0.910 149 116 37 0.315 0.062
rs6920220 324 175 16 0.201 0.218 213 78 7 0.154 1
rs3761847 186 243 87 0.404 0.648 117 133 49 0.387 0.275
rs10818488 186 240 85 0.401 0.645 116 134 50 0.390 0.278
  1. HWE = Hardy-Weinberg equilibrium; MAF = minor allele frequency; OA = osteoarthritis; RA = rheumatoid arthritis; SNP = single nucleotide polymorphism. Numbers of genotypes (11, 12, 22) according to alleles from Table 2.
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