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Table 3 Genes with the most discordant changes in expression in Mmp8+/+ and Mmp8-/-arthritic mice

From: Matrix metalloproteinase-8 deficiency increases joint inflammation and bone erosion in the K/BxN serum-transfer arthritis model

Gene

Fold change: CRL Mmp8-/-vs. RA Mmp8-/-(A)

Fold change: CRL Mmp8+/+vs. RA Mmp8+/+(B)

Ratio A/B

Anpep

2.107

3.766

0.559

Arsi

3.440

4.685

0.734

Aspa

0.289

0.195

1.481

C1qtnf3

5.773

8.349

0.691

Capn6

5.503

11.324

0.485

Ces3

0.050

0.074

0.682

Csgalnact1

4.318

5.906

0.731

Ddefl1

1.411

2.010

0.702

Fbln2

2.254

3.128

0.720

Gltd5d1

1.411

2.158

0.654

Grb10

1.639

2.421

0.677

H19

3.154

5.834

0.541

Ifitm1

2.100

4.232

0.496

Il1 β

5.014

3.711

1.351

Itga5

2.184

3.079

0.709

Mmp3

27.264

41.104

0.663

Nt5dc2

3.532

4.891

0.722

P4ha3

6.826

9.504

0.718

Postn

2.949

4.571

0.645

Prokr2

4.791

3.527

1.358

Ptgfrn

1.705

2.407

0.708

Ptx3

6.117

4.493

1.361

Rentla

0.031

0.043

0.709

Sfrp1

8.278

11.900

0.696

Slc39a14

5.882

7.949

0.739

Sult1a1

0.251

0.181

1.379

Syne2

0.590

0.335

1.759

TenascinN

3.653

5.793

0.631

Tpd52

2.410

1.781

1.353

  1. Genes with the most discordant changes (<0.75 or >1.35) in expression in Mmp8+/+ and Mmp8-/-arthritic mice in relation to their respective nonarthritic controls (selected from arthritis-associated genes according to Bonferroni-corrected P < 0.01). Bold genes were chosen for confirmatory real-time PCR. CRL, control; RA, rheumatoid arthritis.