Table 4 Haplotype frequencies in a case-control cohort of patients with rheumatoid arthritis

AGG

0.827

426.9: 101.1, 273.0: 45.0

0.808, 0.858

0.0625

GAA

0.145

81.0: 447.0, 42.0: 276.0

0.153, 0.132

0.3939

AAG

0.012

7.8: 520.2, 2.0: 316.0

0.015, 0.006

0.2649

Block 2

AA

0.814

418.9: 109.1, 269.9: 48.1

0.793, 0.849

0.0446

GG

0.155

87.9: 440.1, 42.9: 275.1

0.166, 0.135

0.2187

AG

0.024

15.1: 512.9, 5.1: 312.9

0.029, 0.016

0.2441

Block 3

GAAG

0.597

297.7: 230.3, 207.0: 111.0

0.564, 0.651

0.0125

AGGA

0.236

135.3: 392.7, 64.0: 254.0

0.256, 0.201

0.0674

AGAG

0.146

83.8: 444.2, 40.0: 278.0

0.159, 0.126

0.1902

AAAG

0.012

6.1: 521.9, 4.0: 314.0

0.012, 0.013

0.8831

Block 4

GAGGGGA

0.6

296.8: 227.2, 207.0: 109.0

0.566, 0.655

0.0112

AGCAAAC

0.202

120.9: 403.1, 49.0: 267.0

0.231, 0.155

0.0081

GGCAAGA

0.149

83.0: 441.0, 42.0: 274.0

0.158, 0.133

0.3157

AGCAAGA

0.022

10.1: 513.9, 8.0: 308.0

0.019, 0.025

0.5599

AGCAAAA

0.017

6.0: 518.0, 8.0: 308.0

0.012, 0.025

0.1299

Block 5

GG

0.669

344.6: 183.4, 220.9: 97.1

0.653, 0.695

0.2075

AA

0.213

112.6: 415.4, 67.6: 250.4

0.213, 0.213

0.9829

AG

0.117

69.7: 458.3, 29.4: 288.6

0.132, 0.092

0.0828

Block 6

AA

0.715

380.5: 145.5, 222.8: 95.2

0.723, 0.701

0.4774

AG

0.18

88.7: 437.3, 63.5: 254.5

0.169, 0.200

0.2564

GG

0.1

53.3: 472.7, 31.5: 286.5

0.101, 0.099

0.9173

Block 7

AA

0.699

374.8: 153.2, 216.9: 101.1

0.710, 0.682

0.3934

AG

0.214

110.9: 417.1, 70.1: 247.9

0.210, 0.220

0.7211

GG

0.085

41.1: 486.9, 30.9: 287.1

0.078, 0.097

0.3288

Block 8

AG

0.531

294.0: 232.0, 153.8: 164.2

0.559, 0.484

0.0336

AA

0.376

187.8: 338.2, 129.2: 188.8

0.357, 0.406

0.1518

GA

0.092

42.9: 483.1, 34.8: 283.2

0.082, 0.109

0.1742