Skip to main content

Table 3 Gene modules resulting from the combination of Gene Ontology, gene-gene interaction, and pathway analysis

From: CD4 T-cell transcriptome analysis reveals aberrant regulation of STAT3 and Wnt signaling pathways in rheumatoid arthritis: evidence from a case–control study

Probe set ID

Gene symbol

Fold change

Q value

229010_at

CBL

2.22

0

212435_at

TRIM33

0.61

0

226294_x_at

FAM91A1

0.33

0

227817_at

PRKCB

2.26

6.101 × 10−16

227073_at

MAP3K2

0.50

1.296 × 10−14

214578_s_at

ROCK1

2.99

4.303 × 10−12

212073_at

CSNK2A1

0.32

5.813 × 10−8

1555613_a_at

ZAP70

0.59

6.82 × 10−6

223300_s_at

CCDC82

0.51

6.82 × 10−6

212366_at

ZNF292

0.59

2.31 × 10−5

214917_at

PRKAA1

0.57

7.15 × 10−5

212249_at

PIK3R1

0.58

0.000141

231777_at

CSNK2B

3.90

0.00076

37152_at

PPARD

0.44

0.000927

231798_at

NOG

1.62

0.00133

225661_at

IFNAR1

2.16

0.002

235980_at

PIK3CA

1.70

0.00264

206359_at

SOCS3

0.62

0.00336

226660_at

RPS6KB1

0.61

0.0101

212764_at

ZEB1

1.83

0.0125

1553725_s_at

ZNF644

0.59

0.0187

203542_s_at

KLF9

0.61

0.0238

211930_at

HNRNPA3

0.64

0.0344