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Table 2 Top 10 Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways related to the most expressed microRNA in the lungs of patients with systemic sclerosis interstitial lung disease compared to controls

From: miR-155 in the progression of lung fibrosis in systemic sclerosis

KEGG pathway

p value

#genes

miRNA

     

ECM-receptor interaction (hsa04512)

<1e-16

16

3

let-7e,

miR-4459,

let-7f

  

Ubiquitin mediated proteolysis (hsa04120)

<1e-16

76

9

miR-182,

miR-141,

miR-125a,

miR-379,

miR-4484,

    

miR-574,

miR-3613,

miR-4739,

miR-20a

 

Wnt signaling pathway (hsa04310)

<1e-16

79

10

miR-155,

miR-205,

miR-1224,

let-7e,

miR-4459,

    

miR-762,

miR-4668,

let-7f,

miR-3613,

miR-20a

MAPK signaling pathway (hsa04010)

<1e-16

132

13

miR-21,

miR-155,

miR-125a,

let-73,

miR-4530,

    

miR-1207,

miR-149,

miR-762,

let-7f,

miR-199a,

    

miR-199b,

miR-3613,

miR-20a

  

Pathways in cancer (hsa05200)

<1e-16

166

15

miR-21,

miR-155,

miR-182,

miR-205,

miR-1224,

    

let-7e,

miR-4459,

miR-4484,

let-7f,

miR-199a,

    

miR-574,

miR-199b,

miR-3613,

miR-4739,

miR-20a

Axon guidance (hsa04360)

7.77E-16

72

11

miR-155,

miR-205,

miR-1224,

miR-379,

miR-4741,

    

miR-762,

miR-4689,

miR-4484,

miR-3613,

miR-4739,

    

miR-20a

    

PI3K-Akt signaling pathway (hsa04151)

2.74E-14

137

12

miR-155,

miR-182,

let-7e,

miR-379,

miR-4459,

    

miR-149,

miR-4668,

let-7f,

miR-199a,

miR-199b,

    

miR-3613,

miR-20a

   

TGF-beta signaling pathway (hsa04350)

5.88E-14

41

10

miR-21,

miR-205,

let-7e,

miR-4668,

miR-451a,

    

miR-4484,

let-7f,

miR-3613,

miR-20a,

miR-455

ErB signaling pathway (hsa04012)

1.17E-13

40

12

miR-155,

miR-205,

miR-193a,

miR-200b,

miR-4530,

    

miR-451a,

miR-4484,

miR-199a,

miR-199b,

miR-200c,

    

miR-3613,

miR-20a

   

Transcriptional misregulation in cancer (hsa05202)

1.23E-13

83

11

miR-182,

miR-205,

miR-1224,

let-7e,

miR-1207,

    

miR-149,

miR-4668,

let-7f,

miR-3613,

miR-20a,

    

miR-455

    
  1. In sequence: pathway names, significance levels based on p value, number of targeted genes, number of miRNA targeting each pathway, and list of miRNA related to each pathway