SNP | Chr | Pos | Gene | RA | Phenotype | P D | P V | P C | OR (CI, 95%) |
---|---|---|---|---|---|---|---|---|---|
rs2476601 a | 1 | 114377568 | PTPN22 | A | Hematologic disorder | 0.0039 | 0.0433 | 5.20e-4 | 9.488 (1.310-68.726) |
Antinuclear antibodies | 0.0146 | 0.0281 | 0.0011 | 0.168 (0.004-0.990) | |||||
rs704840 | 1 | 173226195 | TNFSF4 | G | Renal disorder | 0.0407 | 0.9210 | 0.1290 | 1.199 (0.941-1.527) |
rs3024505 | 1 | 206939904 | IL10 | T | Arthritis | 0.0325 | 0.1540 | 0.0170 | 1.557 (1.091-2.221) |
rs3768792 | 2 | 213871709 | IKZF2 | C | Photosensitivity | 0.0437 | 0.3320 | 0.4580 | 0.893 (0.674-1.184) |
Hematologic disorder | 0.0319 | 0.1880 | 0.0143 | 0.507 (0.301-0.855) | |||||
rs9311676 | 3 | 58470351 | ABHD6,PXK | C | Oral ulcers | 0.0338 | 0.7960 | 0.9210 | 0.832 (0.674-1.028) |
rs564799 | 3 | 159728987 | IL12A | C | Discoid rash | 0.0411 | 0.1410 | 0.6853 | 0.942 (0.674-1.316) |
rs1270942 | 6 | 31918860 | MHC class III | C | Arthritis | 0.0138 | 0.6670 | 0.0407 | 1.530 (1.010-2.346) |
rs9462027 | 6 | 34797241 | UHRF1BP1 | A | Malar rash | 0.0263 | 0.1730 | 0.0137 | 1.333 (1.071-1.660) |
Oral ulcers | 0.0251 | 0.8950 | 0.0933 | 1.210 (0.971-1.508) | |||||
rs6932056 | 6 | 138242437 | TNFAIP3 | C | Serositis | 0.0193 | 0.8140 | 0.1364 | 1.580 (0.898-2.781) |
rs4917014 | 7 | 50305863 | IKZF1 | T | Oral ulcers | 0.0280 | 0.1550 | 0.5821 | 0.944 (0.753-1.184) |
rs2663052 | 10 | 50069395 | WDFY4 | C | Neurologic disorder | 0.0370 | 0.1590 | 0.6311 | 0.963 (0.662-1.401) |
rs4948496 | 10 | 63805617 | ARID5B | C | Malar rash | 0.0331 | 0.4580 | 0.3258 | 1.116 (0.906-1.375) |
Photosensitivity | 0.0202 | 0.9480 | 0.0911 | 1.203 (0.977-1.483) | |||||
rs2732549 | 11 | 35088399 | CD44 | T | Immunologic disorder | 0.0163 | 0.9910 | 0.0907 | 1.277 (0.976-1.670) |
rs7941765 | 11 | 128499000 | ETS1,FLI1 | C | Arthritis | 0.0072 | 0.0701 | 0.0015 | 1.470 (1.151-1.877) |
rs10774625 | 12 | 111910219 | SH2B3 | A | Serositis | 0.0207 | 0.0756 | 0.0038 | 0.715 (0.571-0.895) |
Renal disorder | 0.0423 | 0.6410 | 0.0773 | 0.814 (0.650-1.018) | |||||
Immunologic disorder | 0.0051 | 0.8190 | 0.0321 | 0.738 (0.566-0.964) | |||||
rs1059312 | 12 | 129278864 | SLC15A4 | C | Serositis | 0.0253 | 0.2370 | 0.0156 | 1.321 (1.053-1.658) |
rs4902562 | 14 | 68731458 | RAD51B | A | Renal disorder | 0.0130 | 0.8670 | 0.1010 | 0.834 (0.664-1.047) |
rs2941509 | 17 | 37921194 | IKZF3 | A | Antinuclear Antibodies | 0.0304 | 0.0413 | 0.4943 | 0.676 (0.237-1.930) |
rs2304256 | 19 | 10475652 | TYK2 | C | Arthritis | 0.0298 | 0.7690 | 0.1841 | 0.826 (0.622-1.096) |