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Table 2 Associations between baseline global DNA (hydroxy)methylation and ΔDAS28 before and after 3 months of therapy

From: Higher baseline global leukocyte DNA methylation is associated with MTX non-response in early RA patients

Methylation

Before MTX

After MTX

  

B (SE)

β

p

B (SE)

β

p

1

Methylation

1.36 (0.67)

0.15

0.044

0.40 (0.55)

0.05

0.471

2

Methylation

1.41 (0.56)

0.15

0.013

0.44 (0.47)

0.06

0.385

 

DAS28

− 0.51 (0.06)

− 0.49

< 0.001

− 0.50 (0.06)

− 0.49

< 0.001

 

Erythrocyte folate (nmol/L)

− 1.00 × 10−3 (2.00 × 10−4)

− 0.17

0.006

− 4.00 × 10−4 (2.00 × 10−4)

− 0.12

0.063

 

BMI (kg/m2)

0.03 (0.02)

0.14

0.025

0.04 (0.02)

0.18

0.005

 

Age (years)

 

  

 
 

Sex

 

 

0.27 (0.16)

0.11

0.098

 

Smoking (current)

 

 

0.28 (0.16)

0.11

0.084

 

ACPA status (positive)

 

  

 
 

Observations

 

181

  

179

 

Hydroxymethylation

Before MTX

After MTX

B (SE)

β

p

B (SE)

β

p

1

Hydroxymethylation

19.56 (18.38)

0.08

0.288

12.52 (19.26)

0.05

0.517

2

Hydroxymethylation

6.90 (15.89)

0.03

0.664

5.92 (16.75)

0.02

0.724

 

DAS28

− 0.54 (0.07)

− 0.52

< 0.001

− 0.52 (0.07)

− 0.51

< 0.001

 

Erythrocyte folate (nmol/L)

− 1.00 × 10−3 (2.00 × 10−4)

− 0.18

0.007

−5.00 × 10−4

(2.00 × 10−4)

− 0.14

0.035

 

BMI (kg/m2)

0.03 (0.02)

0.12

0.062

0.04 (0.02)

0.18

0.006

 

Age (years)

0.01 (0.01)

0.10

0.125

0.01 (0.01)

0.13

0.057

 

Sex

0.22 (0.17)

0.08

0.176

0.28 (0.16)

0.11

0.087

 

Smoking (current)

 

 

0.28 (0.16)

0.11

0.090

 

ACPA status (positive)

 

  

 
 

Observations

 

181

  

177

 
  1. Association between mean % global DNA (hydroxy)methylation and ΔDAS28 were tested in a crude univariate model (1) and adjusted for potential confounders (2). Potential confounders were baseline DAS28 score, baseline erythrocyte folate levels (nmol/L), BMI (kg/m2), age (years), sex, smoking status (current smoker versus former + never smoker), and ACPA status. Only biomarkers that changed the association with > 10% were considered confounders. B beta coefficient, SE standard error, β standardized beta coefficients. p < 0.05 was considered significant