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Table 2 Associations between baseline global DNA (hydroxy)methylation and ΔDAS28 before and after 3 months of therapy

From: Higher baseline global leukocyte DNA methylation is associated with MTX non-response in early RA patients

Methylation Before MTX After MTX
   B (SE) β p B (SE) β p
1 Methylation 1.36 (0.67) 0.15 0.044 0.40 (0.55) 0.05 0.471
2 Methylation 1.41 (0.56) 0.15 0.013 0.44 (0.47) 0.06 0.385
  DAS28 − 0.51 (0.06) − 0.49 < 0.001 − 0.50 (0.06) − 0.49 < 0.001
  Erythrocyte folate (nmol/L) − 1.00 × 10−3 (2.00 × 10−4) − 0.17 0.006 − 4.00 × 10−4 (2.00 × 10−4) − 0.12 0.063
  BMI (kg/m2) 0.03 (0.02) 0.14 0.025 0.04 (0.02) 0.18 0.005
  Age (years)     
  Sex    0.27 (0.16) 0.11 0.098
  Smoking (current)    0.28 (0.16) 0.11 0.084
  ACPA status (positive)     
  Observations   181    179  
Hydroxymethylation Before MTX After MTX
B (SE) β p B (SE) β p
1 Hydroxymethylation 19.56 (18.38) 0.08 0.288 12.52 (19.26) 0.05 0.517
2 Hydroxymethylation 6.90 (15.89) 0.03 0.664 5.92 (16.75) 0.02 0.724
  DAS28 − 0.54 (0.07) − 0.52 < 0.001 − 0.52 (0.07) − 0.51 < 0.001
  Erythrocyte folate (nmol/L) − 1.00 × 10−3 (2.00 × 10−4) − 0.18 0.007 −5.00 × 10−4
(2.00 × 10−4)
− 0.14 0.035
  BMI (kg/m2) 0.03 (0.02) 0.12 0.062 0.04 (0.02) 0.18 0.006
  Age (years) 0.01 (0.01) 0.10 0.125 0.01 (0.01) 0.13 0.057
  Sex 0.22 (0.17) 0.08 0.176 0.28 (0.16) 0.11 0.087
  Smoking (current)    0.28 (0.16) 0.11 0.090
  ACPA status (positive)     
  Observations   181    177  
  1. Association between mean % global DNA (hydroxy)methylation and ΔDAS28 were tested in a crude univariate model (1) and adjusted for potential confounders (2). Potential confounders were baseline DAS28 score, baseline erythrocyte folate levels (nmol/L), BMI (kg/m2), age (years), sex, smoking status (current smoker versus former + never smoker), and ACPA status. Only biomarkers that changed the association with > 10% were considered confounders. B beta coefficient, SE standard error, β standardized beta coefficients. p < 0.05 was considered significant
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