SNP | FRQ | OR | P | P_con_B27 | P_con_B27_B40 |
---|---|---|---|---|---|
2-digit HLA alleles | |||||
HLA-C*15 | 0.04 | 1.01 | 0.97 | 9.30 × 10−19 | 9.88 × 10−17 |
HLA-DQB1*04 | 0.07 | 0.96 | 0.68 | 5.98 × 10−7 | 1.86 × 10−6 |
HLA-DRB1*13 | 0.07 | 0.37 | 6.28 × 10−15 | 2.53 × 10−4 | 7.85 × 10−4 |
HLA-B*40 | 0.12 | 0.58 | 2.63 × 10−11 | 2.54 × 10−4 | NA |
HLA-C*03 | 0.20 | 0.43 | 9.19 × 10−33 | 6.08 × 10−4 | 9.92 × 10−5 |
HLA-DQB1*06 | 0.22 | 0.52 | 1.50 × 10−20 | 6.32 × 10−4 | 1.25 × 10−3 |
HLA-B*53 | 0.00 | 0.62 | 0.46 | 7.33 × 10−4 | 2.87 × 10−4 |
HLA-B*38 | 0.01 | 2.10 | 0.041 | 9.55 × 10−4 | 3.35 × 10−4 |
HLA-C*05 | 0.01 | 0.25 | 2.75 × 10−3 | 1.77 × 10−3 | 2.68 × 10−3 |
HLA-B*15 | 0.10 | 0.40 | 1.13 × 10−21 | 0.021 | 0.082 |
HLA-DRB1*04 | 0.15 | 1.09 | 0.26 | 0.028 | 0.032 |
HLA-DPB1*45 | 0.00 | 0.98 | 0.97 | 0.029 | 0.025 |
HLA-DQA1*06 | 0.06 | 4.09 | 3.05 × 10−17 | 0.048 | 0.035 |
4-digit HLA alleles | |||||
HLA-C*1502 | 0.03 | 1.15 | 0.37 | 6.78 × 10−23 | 4.10 × 10−20 |
HLA-B*4002 | 0.03 | 0.79 | 0.16 | 9.55 × 10−12 | 6.54 × 10−8 |
HLA-DRB1*0405 | 0.06 | 0.93 | 0.51 | 2.30 × 10−7 | 1.06 × 10−6 |
HLA-DQB1*0401 | 0.05 | 0.90 | 0.45 | 5.05 × 10−6 | 1.54 × 10−5 |
HLA-B*4005 | 0.00 | 1.72 | 0.55 | 4.21 × 10−4 | 2.09 × 10−3 |
HLA-B*5301 | 0.00 | 0.62 | 0.46 | 7.20 × 10−4 | 2.82 × 10−4 |
HLA-DRB1*1302 | 0.05 | 0.37 | 5.63 × 10−13 | 1.13 × 10−3 | 2.88 × 10−3 |
HLA-B*3802 | 0.01 | 2.29 | 0.036 | 2.16 × 10−3 | 1.01 × 10−3 |
HLA-C*0501 | 0.00 | 0.38 | 0.054 | 3.98 × 10−3 | 5.60 × 10−3 |
HLA-DQA1*0102 | 0.27 | 0.36 | 3.45 × 10−30 | 4.68 × 10−3 | 0.013 |
HLA-B*4446 | 0.03 | 0.21 | 5.69 × 10−14 | 6.15 × 10−3 | 0.012 |
HLA-C*0304 | 0.08 | 0.53 | 1.72 × 10−9 | 0.012 | 6.95 × 10−5 |
HLA-DRB1*1501 | 0.08 | 0.56 | 5.36 × 10−8 | 0.022 | 0.024 |
HLA-B*4402 | 0.00 | 0.30 | 0.13 | 0.027 | 0.033 |
HLA-DPB1*4501 | 0.00 | 0.97 | 0.96 | 0.029 | 0.024 |
HLA-DQB1*0603 | 0.01 | 0.41 | 2.55 × 10−3 | 0.036 | 0.055 |
HLA-B*1501 | 0.04 | 0.24 | 2.94 × 10−15 | 0.047 | 0.11 |
HLA-DQA1*0601 | 0.06 | 4.09 | 3.04 × 10−17 | 0.048 | 0.035 |
HLA-B*5502 | 0.02 | 0.28 | 9.64 × 10−6 | 0.050 | 0.10 |