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Table 2 Total number of cells recovered and cell type recovery overall is comparable between preservation methods in frozen media (CryoStor® CS10) compared to fresh media (RPMI) in the 18 cell clusters within the 9 cell groupings

From: Single-cell transcriptome conservation in a comparative analysis of fresh and cryopreserved human skin tissue: pilot in localized scleroderma

Subject and preservation method

P1

CryoStor

P1

RPMI

P2

CryoStor

P2

RPMI

P3

CryoStor

P3

RPMI

Avg. % cell type per preservation

Total number cells recovered

2576

3549

1707

3846

1959

1274

CryoStor

RPMI

Main cell grouping

Clusters

        

 T/NK cell (%)

0, 11

37

19

6

14

15

2

22

14

 Epithelial/RBC (%)

1, 4

18

5

19

13

25

40

20

14

 Macrophages (%)

2

24

15

0

1

0

0

10

7

 Keratinocytes (%)

3, 8, 10, 12, 13, 14, 16

7

48

26

31

22

32

17

38

 Epithelial (%)

5

1

1

24

10

5

6

8

5

 Fibroblast (%)

6, 17

5

6

5

14

7

0

6

9

 Pericyte (%)

7, 9

6

3

14

13

22

19

13

10

 Dendritic cells (%)

15

2

2

4

3

3

0

2

2

 Lymphatic endothelial (%)

18

1

1

1

1

1

0

1

1