From: Investigating a pathogenic role for TXNDC5 in rheumatoid arthritis
Haplotype | Freq. | Case, Control Ratio Counts | Case, Control Frequencies | P-Value |
---|---|---|---|---|
Block 1 | Â | Â | Â | Â |
AGG | 0.827 | 426.9: 101.1, 273.0: 45.0 | 0.808, 0.858 | 0.0625 |
GAA | 0.145 | 81.0: 447.0, 42.0: 276.0 | 0.153, 0.132 | 0.3939 |
AAG | 0.012 | 7.8: 520.2, 2.0: 316.0 | 0.015, 0.006 | 0.2649 |
Block 2 | Â | Â | Â | Â |
AA | 0.814 | 418.9: 109.1, 269.9: 48.1 | 0.793, 0.849 | 0.0446 |
GG | 0.155 | 87.9: 440.1, 42.9: 275.1 | 0.166, 0.135 | 0.2187 |
AG | 0.024 | 15.1: 512.9, 5.1: 312.9 | 0.029, 0.016 | 0.2441 |
Block 3 | Â | Â | Â | Â |
GAAG | 0.597 | 297.7: 230.3, 207.0: 111.0 | 0.564, 0.651 | 0.0125 |
AGGA | 0.236 | 135.3: 392.7, 64.0: 254.0 | 0.256, 0.201 | 0.0674 |
AGAG | 0.146 | 83.8: 444.2, 40.0: 278.0 | 0.159, 0.126 | 0.1902 |
AAAG | 0.012 | 6.1: 521.9, 4.0: 314.0 | 0.012, 0.013 | 0.8831 |
Block 4 | Â | Â | Â | Â |
GAGGGGA | 0.6 | 296.8: 227.2, 207.0: 109.0 | 0.566, 0.655 | 0.0112 |
AGCAAAC | 0.202 | 120.9: 403.1, 49.0: 267.0 | 0.231, 0.155 | 0.0081 |
GGCAAGA | 0.149 | 83.0: 441.0, 42.0: 274.0 | 0.158, 0.133 | 0.3157 |
AGCAAGA | 0.022 | 10.1: 513.9, 8.0: 308.0 | 0.019, 0.025 | 0.5599 |
AGCAAAA | 0.017 | 6.0: 518.0, 8.0: 308.0 | 0.012, 0.025 | 0.1299 |
Block 5 | Â | Â | Â | Â |
GG | 0.669 | 344.6: 183.4, 220.9: 97.1 | 0.653, 0.695 | 0.2075 |
AA | 0.213 | 112.6: 415.4, 67.6: 250.4 | 0.213, 0.213 | 0.9829 |
AG | 0.117 | 69.7: 458.3, 29.4: 288.6 | 0.132, 0.092 | 0.0828 |
Block 6 | Â | Â | Â | Â |
AA | 0.715 | 380.5: 145.5, 222.8: 95.2 | 0.723, 0.701 | 0.4774 |
AG | 0.18 | 88.7: 437.3, 63.5: 254.5 | 0.169, 0.200 | 0.2564 |
GG | 0.1 | 53.3: 472.7, 31.5: 286.5 | 0.101, 0.099 | 0.9173 |
Block 7 | Â | Â | Â | Â |
AA | 0.699 | 374.8: 153.2, 216.9: 101.1 | 0.710, 0.682 | 0.3934 |
AG | 0.214 | 110.9: 417.1, 70.1: 247.9 | 0.210, 0.220 | 0.7211 |
GG | 0.085 | 41.1: 486.9, 30.9: 287.1 | 0.078, 0.097 | 0.3288 |
Block 8 | Â | Â | Â | Â |
AG | 0.531 | 294.0: 232.0, 153.8: 164.2 | 0.559, 0.484 | 0.0336 |
AA | 0.376 | 187.8: 338.2, 129.2: 188.8 | 0.357, 0.406 | 0.1518 |
GA | 0.092 | 42.9: 483.1, 34.8: 283.2 | 0.082, 0.109 | 0.1742 |