dbSNP identity | Allele/ Geno type | Number of patients with RA (%) | Number of controls (%) | Pvalue | Pvalue after multivariate logistic regression | Pvalue after multiple testing correction (Bonferroni method) | Odds Ratio (%95 CI) | HWE test for case (df = 1) | HWE test for control (df = 1) |
---|---|---|---|---|---|---|---|---|---|
rs7827474 | C | 1(0.010) | 1(0.003) | 0.395319 | 3.138614 (0.194542~50.636475) | ||||
G | 101(0.990) | 317(0.997) | |||||||
CG | 1(0.020) | 1(0.006) | 0.394186 | 0.943634 | 0.968272 | ||||
GG | 50(0.980) | 158(0.994) | |||||||
rs3808540* | A | 64(0.627) | 196(0.613) | 0.786888 | 1.065521 (0.672573~1.688048} | ||||
G | 38(0.373) | 124(0.388) | |||||||
AA | 19(0.373) | 64(0.400) | 0.475302 | 0.518298 | 0.185552 | ||||
AG | 26(0.510) | 68(0.425) | |||||||
GG | 6(0.118) | 28(0.175) | |||||||
rs11774422 | A | 0(0.000) | 1(0.003) | 0.571929 | |||||
G | 102(1.000) | 319(0.997) | |||||||
AG | 0(0.000) | 1(0.006) | 0.571472 | 1 | 0.968372 | ||||
GG | 51(1.000) | 159(0.994) | |||||||
rs34456327 | A | 98(1.000) | 312(1.000) | ||||||
AA | 49(1.000) | 156(1.000) | |||||||
rs7821248 | A | 0(0.000) | 1(0.003) | 0.575955 | |||||
G | 98(1.000) | 313(0.997) | |||||||
AG | 0(0.000) | 1(0.006) | 0.57549 | 1 | 0.968069 | ||||
GG | 49(1.000) | 156(0.994) | |||||||
rs13276893 | A | 69(0.704) | 218(0.717) | 0.804077 | 0.938627 (0.569058~1.548209) | ||||
G | 29(0.296) | 86(0.283) | |||||||
AA | 22(0.449) | 77(0.507) | 0.475953 | 0.116312 | 0.641532 | ||||
AG | 25(0.510) | 64(0.421) | |||||||
GG | 2(0.041) | 11(0.072) | |||||||
rs2220972 | G | 102(1.000) | 320(1.000) | ||||||
GG | 51(1.000) | 160(1.000) | |||||||
rs1032551 | C | 30(0.306) | 110(0.374) | 0.2236 | 0.737968 (0.451984~1.204903) | ||||
G | 68(0.694) | 184(0.626) | |||||||
CC | 0(0.000) | 13(0.088) | 0.096659 | ||||||
CG | 30(0.612) | 84(0.571) | |||||||
GG | 19(0.388) | 50(0.340) | |||||||
rs34282382 | A | 102(1.000) | 298(0.949) | 0.020115 | |||||
C | 0(0.000) | 6(0.051) | |||||||
AA | 51(1.000) | 141(0.898) | 0.017687 | 1 | 0.501138 | ||||
AC | 0(0.000) | 16(0.102) | |||||||
rs7840971 | A | 0(0.000) | 1(0.003) | 0.571929 | |||||
G | 102(1.000) | 319(0.997) | |||||||
AG | 0(0.000) | 1(0.006) | 0.571472 | 1 | 0.968372 | ||||
GG | 51(1.000) | 159(0.994) | |||||||
rs7841304 | A | 0(0.000) | 1(0.003) | 0.576716 | |||||
G | 92(1.000) | 295(0.997) | |||||||
AG | 0(0.000) | 1(0.007) | 0.576223 | 1 | 0.967107 | ||||
GG | 46(1.000) | 147(0.993) | |||||||
rs7818073 | T | 102(1.000) | 320(1.000) | ||||||
TT | 51(1.000) | 160(1.000) | |||||||
rs7841425 | A | 15(0.153) | 91(0.318) | 0.001611 | 0.002234 | 0.01396 | 0.387263 (0.211775~0.708169} | ||
C | 83(0.847) | 195(0.682) | |||||||
AA | 0(0.000) | 17(0.119) | 0.007879 | 0.005902 | 0.205909 | 0.330884 | |||
AC | 15(0.306) | 57(0.399) | |||||||
CC | 34(0.694) | 69(0.483) |