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Table 3 Synthetic peptides for screening T cell epitopes

From: Arthritogenic T cell epitope in glucose-6-phosphate isomerase-induced arthritis

Peptide number

Peptide

Synthetic peptide sequence

1

1–20

H-MAA LT R DP Q FQKLQQWYREH-OH

2

23–42

H-ELNLRRL FD A NK D RFNHFSL-OH

3

37–56

H-FNHFS LT L NT N HGHILVDYS-OH

4

51–70

H-ILVDYS KN L VT E DVMRMLVD-OH

5

71–90

H-LA KS R GV E A A RE R MF N GEKI-OH

6

96–115

H-RAVL HV A LR N RS N TPILVDG-OH

7

145–164

H-TGKTI TD V IN I GIGGSDLGP-OH

8

162–181

H-LGPLMV TE A LK P YSSGGPRV-OH

9

168–187

H-TEALKP YS S GG P RVWYVSNI-OH

10

176–195

H-SGGPRV WY V SN I DGTHIAKT-OH

11

191–210

H-HIAKTL AQ L NP E SSLFIIAS-OH

12

200–219

H-NP ES S LF I IA S KT F TT Q ETI-OH

13

225–244

H-AKEWFL Q AA K DP SAVAKHFV-OH

14

238–257

H-AVAKHF VA L ST N TTKVKEFG-OH

15

247–266

H-STNTTKV KE F GI D PQNMFEF-OH

16

280–299

H-IGLSIA LH V GF D NFEQLLSG-OH

17

313–332

H-EKNAPVL LA L LG I WYINCFG-OH

18

327–346

H-YI NC F GC E TH A ML P YD Q YLH-OH

19

386–405

H-NGQHAF YQ L IH Q GTKMIPCD-OH

20

400–419

H-KMIP CD FL I PV QT Q HPIRKG-OH

21

420–439

H-LHHKILL AN F LA Q TEALMRG-OH

22

445–464

H-ARKELQAA GK S PE D LERLLP-OH

23

484–503

H-PFMLGA LV A MY E HKIFVQGI-OH

24

533–552

H-AQVTS HD A ST N GL I NFIKQQ-OH

25

539–558

H-DASTNGL IN F IK Q QREARVQ-OH

  1. Listed are 25 20-mer unpurified peptides in which each core sequence were centred around. Amino acid residues constituting the core sequence and those thought to bind anchors of I-Aq are underlined and shown in bold letters, respectively.