Minor allele frequency (%)a | Mantel – Haenszel analysis | |||
---|---|---|---|---|
SNP (locus) | SLE cases | Controls | OR (95% CI) | P value |
rs1143679 (ITGAM) | 27.9 (83/298) | 15.7 (181/1,154) | 2.08 (1.5 to 2.8) | 1.2 × 10-6 |
rs7574865 (STAT4) | 31.7 (64/202) | 21.5 (159/740) | 1.69 (1.2 to 2.4) | 0.0025 |
rs13277113 (C8orf13-BLK) | 31.0 (88/284) | 25.1 (267/1,064) | 1.34 (1.0 to 1.8) | 0.045 |
rs2304256 (TYK2) | 26.8 (80/298) | 28.8 (334/1,158) | 0.91 (0.7 to 1.2) | 0.5 |
rs17435 (MECP2)b | 29.2 (42/144) | 18.5 (105/568) | 1.82 (1.2 to 2.8) | 0.0046 |
rs10798269 (1q25.1) | 28.0 (84/300) | 30.7 (355/1,158) | 0.88 (0.7 to 1.2) | 0.4 |
rs17266594 (BANK1) | 26.2 (56/214) | 28.4 (227/798) | 0.89 (0.6 to 1.3) | 0.5 |
rs4963128 (KIAA1542) | 28.0 (84/300) | 34.9 (403/1,156) | 0.73 (0.6 to 1.0) | 0.025 |
rs6445975 (PXK) | 32.1 (86/268) | 24.8 (265/1,068) | 1.43 (1.1 to 1.9) | 0.016 |
rs509749 (LY9) | 40.6 (121/298) | 42.9 (496/1,156) | 0.91 (0.7 to 1.2) | 0.5 |