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Table 1 DNA sequences of the sense and antisense primers for real-time PCR analysis and cycler conditions

From: Advanced glycation end products induce cell cycle arrest and proinflammatory changes in osteoarthritic fibroblast-like synovial cells

Gene

Accession number

Primer sequences

Annealing temperature (°C)

Number of cycles

Product size (bp)

GAPDH

[GenBank:J02642]

5'-CAATGACCCCTTCATTGACC-3' (sense)

5'-TGGACTCCACGACGTACTCA-3' (antisense)

59

30

197

IL-6

[GenBank:M14584]

5'-CTTTTGGAGTTTGAGGTATACCTAG-3' (sense)

5'-CGCAGAATGAGATGAGTTGTC-3' (antisense)

62

30

233

NFκB p65

[GenBank:NM_021975]

5'-AGTACCTGCCAGATACAGACGAT-3' (sense)

5'-GATGGTGCTCAGGGATGACGTA-3' (antisense)

62

30

215

Osteoprotegerin

[GenBank:U94332]

5'-TGCAGTACGTCAAGCAGGAG-3' (sense)

5'-CCCATCTGGACATCTTTTGC-3' (antisense)

53

30

175

p27Kip1

[GenBank:NM_004064]

5'-AGATGTCAAACGTGCGAGTG-3' (sense)

5'-TCTCTGCAGTGCTTCTCCAA-3' (antisense)

59

40

154

RAGE

[GenBank:AB036432]

5'-GGAAAGGAGACCAAGTCCAA-3' (sense)

5'-CATCCAAGTGCCAGCTAAGA-3' (antisense)

59

30

166

RANKL

[GenBank:AF019047]

5'-GCTTGAAGCTCAGCCTTTTG-3' (sense)

5'-CGAAAGCAAATGTTGGCATA-3' (antisense)

59

40

192

TNF-α

[GenBank:NM_000594]

5'-GGCAGTCAGATCATCTTCTCGAA-3' (sense)

5'-AAGAGGACCTGGGAGTAGATGA-3' (antisense)

62

40

195

  1. GAPDH = glyceraldehyde 3-phosphate dehydrogenase;
  2. NFκB = nuclear factor kappa B; RAGE = receptor for advanced glycation end products; RANKL = receptor activator of NFκB ligand.