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Table 6 Interactions between the premises/genes of the pruned rule sets generated from the ‘Jena’, ‘Berlin’, and ‘Leipzig’ data sets (total of 57 rules), as found by Pathway Studio and exemplified for the conclusion ‘RA’

From: Identification of rheumatoid arthritis and osteoarthritis patients by transcriptome-based rule set generation

Relation

Type

Cell type

Number of references

JAK2 → STAT1

Promoter binding

Various

(70)

JAK2 → CSF2RB

Regulation

Hematopoietic cells

(3)

STAT1 → GBP1

Protein modification

Fibroblasts

(3)

  1. For more details, see Additional file 8. Pathway Studio from Elsevier, Munich, Germany.