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Table 2 Association of HLA-B amino-acid haplotype with susceptibility to ankylosing spondylitis

From: An HLA-C amino-acid variant in addition to HLA-B*27 confers risk for ankylosing spondylitis in the Korean population

Amino-acid haplotype

Haplotype frequency

Association for AS

70

97

114

Cases

Controls

OR (95 % CI)

P value

Lys

Asn

His

0.482

0.025

243.0 (172.4–342.4)

2.70 × 10−216

Asn

Ser

Asn

0.064

0.087

0.72 (0.56–0.91)

6.38 × 10−3

Gln

Ser

Asp

0.024

0.038

0.65 (0.45–0.95)

2.55 × 10−2

Asn

Arg

Asn

0.064

0.103

0.59 (0.47–0.75)

1.49 × 10−5

Gln

Thr

Asn

0.042

0.069

0.58 (0.44–0.78)

2.77 × 10−4

Gln

Arg

Asp

0.024

0.044

0.54 (0.37–0.79)

1.24 × 10−3

Asn

Thr

Asn

0.121

0.217

0.48 (0.40–0.58)

2.02 × 10−15

Ser

Arg

Asp

0.031

0.065

0.46 (0.33–0.64)

3.70 × 10−6

Asn

Arg

Asp

0.141

0.319

0.35 (0.30–0.42)

2.74 × 10−34

Asn

Trp

Asn

0.004

0.014

0.27 (0.11–0.66)

4.34 × 10−3

Asn

Ser

Asp

0.001

0.012

0.06 (0.01–0.44)

5.69 × 10−3

  1. HLA human leukocyte antigen, AS ankylosing spondylitis, OR odds ratio, CI confidence interval
  2. *Each of the HLA-B classic alleles observed in the Korean subjects belongs to one of the amino-acid haplotypes. Lys-Asn-His: *27:04, *27:05; Asn-Ser-Asn: *08:01, *40:02, *48:01; Gln-Ser-Asp: *07:02; Asn-Arg-Asn: *13:01, *37:01, *38:02, *39:01, *40:01, *51:06; Gln-Thr-Asn: *54:01, *55:01, *55:02, *56:01, *56:05; Gln-Arg-Asp: *46:01; Asn-Thr-Asn: *13:02, *40:06, *51:01, *51:02, *52:01, *59:01; Ser-Arg-Asp: *58:01; Asn-Arg-Asp: *15:01, *15:02, *15:11, *15:18, *15:27, *15:38, *18:01, *35:01, *35:03, *44:02, *44:03; Asn-Trp-Asn: *14:01; Asn-Ser-Asp: *15:07, *40:03