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Table 2 Significant extracted KEGG 2019 pathways that are associated with p < 0.05, FC > 1.5 or < 0.67 proteins in affected versus unaffected comparison

From: Comparative analysis of affected and unaffected areas of systemic sclerosis skin biopsies by high-throughput proteomic approaches

Pathway

Pathway’s p value

Pathway

Pathway’s p value

Hypertrophic cardiomyopathy (HCM)

1.53E−08

Staphylococcus aureus infection

2.25E−02

Dilated cardiomyopathy (DCM)

2.47E−08

Adherens junction

2.50E−02

Cardiac muscle contraction

2.61E−07

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

2.50E−02

Adrenergic signalling in cardiomyocytes

6.10E−07

Kaposi sarcoma-associated herpesvirus infection

2.55E−02

Focal adhesion

5.90E−05

Calcium signalling pathway

2.62E−02

Regulation of actin cytoskeleton

8.81E−05

Bacterial invasion of epithelial cells

2.63E−02

Pertussis

1.30E−04

Gastric acid secretion

2.70E−02

Complement and coagulation cascades

1.52E−04

Antigen processing and presentation

2.83E−02

Proteoglycans in cancer

6.09E−04

Epstein-Barr virus infection

3.11E−02

Glycolysis/gluconeogenesis

1.61E−03

PI3K-Akt signalling pathway

3.24E−02

Phagosome

1.79E−03

Human immunodeficiency virus 1 infection

3.56E−02

Cellular senescence

2.16E−03

Fc gamma R-mediated phagocytosis

3.84E−02

cGMP-PKG signalling pathway

2.47E−03

Small cell lung cancer

4.00E−02

ECM-receptor interaction

2.75E−03

Amoebiasis

4.23E−02;3.79E−02

Histidine metabolism

2.75E−03

Aldosterone synthesis and secretion

4.39E−02

AGE-RAGE signalling pathway in diabetic complications

4.80E−03

Pancreatic secretion

4.39E−02

Human papillomavirus infection

5.29E−03

HIF-1 signalling pathway

4.56E−02

Fructose and mannose metabolism

5.62E−03

Chagas disease (American trypanosomiasis)

4.80E−02

Leukocyte transendothelial migration

6.58E−03

Ribosome

1.72E−15

Human T cell leukaemia virus 1 infection

6.59E−03

Huntington disease

3.82E−04

Ferroptosis

8.17E−03

Systemic lupus erythematosus

8.72E−04

Platelet activation

8.70E−03

Spliceosome

8.97E−04

Carbohydrate digestion and absorption

9.83E−03

Synaptic vesicle cycle

2.00E−03

Vascular smooth muscle contraction

1.03E−02

Alcoholism

2.65E−03

Apelin signalling pathway

1.14E−02

Oxidative phosphorylation

8.91E−03

Parkinson disease

1.25E−02;1.06E−02

Endocrine and other factor-regulated calcium reabsorption

1.03E−02

Mineral absorption

1.30E−02

Necroptosis

1.52E−02

Cell adhesion molecules (CAMs)

1.33E−02

Steroid hormone biosynthesis

1.58E−02

Viral myocarditis

1.72E−02

Arachidonic acid metabolism

1.74E−02

Tight junction

2.02E−02

Viral carcinogenesis

2.66E−02

Shigellosis

2.06E−02

  
  1. This table shows the significant extracted pathways that are associated with p < 0.05, FC > 1.5 or < 0.67 proteins in affected versus unaffected comparison. Bold and italic fonts indicate pathways that were extracted from p < 0.05, FC > 1.5 and p < 0.05, FC < 0.67 proteins, respectively