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Table 1 RNA-seq results for known hypertrophic genes

From: Thyroid hormone induces ossification and terminal maturation in a preserved OA cartilage biomimetic model

 

FC T3

P-value T3

FC OAvsH

P-value OAvsH

FC OAvsP

P-value OAP

ALPL

1.71

n.s.

NA

NA

1.47

n.s.

COL1A1

-3.00

2.94 x 10-03

126

7.46 x 10-22

1.14

n.s.

COL10A1

-3.90

9.22 x 10-04

8.6

7.39 x 10-08

-1.33

n.s.

EPAS1

1.59

9.58 x 10-03

NA

NA

-1.17

3,03 x 10-03

MMP13

NA

NA

50

6.07 x 10-18

-1.12

n.s.

  1. Statistical difference for T3 RNA-seq was determined by DESeq analysis. Fold change (FC) and uncorrected P-values are shown for T3 versus control. Data for OA versus healthy (OAvsH) from Karlsson et al. [20]. Data for OA versus preserved (OAvsP) from Coutinho de Almeida et al. [16]
  2. N.s. not significant, NA Not available