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Table 2 Primers used for real-time RT-PCR

From: Preserved skeletal muscle protein anabolic response to acute exercise and protein intake in well-treated rheumatoid arthritis patients

Target

Sense primer

Antisense primer

RPLP0

GGAAACTCTGCATTCTCGCTTCCT

CCAGGACTCGTTTGTACCCGTTG

GAPDH

CCTCCTGCACCACCAACTGCTT

GAGGGGCCATCCACAGTCTTCT

IGF-IEa

GACATGCCCAAGACCCAGAAGGA

CGGTGGCATGTCACTCTTCACTC

IGF-IEc

GCCCCCATCTACCAACAAGAACAC

CGGTGGCATGTCACTCTTCACTC

HGF

TGAAATATGTGCTGGGGCTGAAA

ACAAACAAGTGGGCCACCATAATCC

Cmet

AACCCGAATACTGCCCAGACCC

TGATATCCGGGACACCAGTTCAG

MCP1

GCCCTTCTGTGCCTGCTGCT

GCAGGTGACTGGGGCATTGATT

COX1

GGTTTGGCATGAAACCCTACACCT

CCTCCAACTCTGCTGCCATCT

COX2

TGGAACATGGAATTACCCAGTTTGTTG

TGTGATACTTTCTGTACTGCGGGTGG

HSP70

GTGGCTGGACGCCAACACCTT

TTACACACCTGCTCCAGCTCCTTC

HSP27

GCTGACGGTCAAGACCAAGGATG

TGAAGCACCGGGAGATGTAGCC

αB-crystallin

GTGTTGGGAGATGTGATTGAGGTG

CTGGGATCCGGTATTTCCTGTGG

Myogenin

CTGCAGTCCAGAGTGGGGCAGT

CTGTAGGGTCAGCCGTGAGCAG

Myf6

GGGCTCGTGATAACGGCTAAGGA

TGTCCACGATGGAAGAAAGGCA

MyoD

ACGAAGGCGCCTACTACAACGA

GACACCGCCGCACTCTTCCC

Myostatin

TGCTGTAACCTTCCCAGGACCA

GCTCATCACAGTCAAGACCAAAATCC

Atrogin1

TGTTACCCAAGGAAAGAGCAGTATGGA

ACGGAGCAGCTCTCTGGGTTATTG

MuRF1

TGGGGGAGCCACCTTCCTCT

ATGTTCTCAAAGCCCTGCTCTGTCT

TNFα

TTCCCCAGGGACCTCTCTCTAATC

GAGGGTTTGCTACAACATGGGCTAC

TNFRI

GGGAGGACAGCGCCCACAAG

CACGAATTCCTTCCAGCGCAAC

TNFRII

CCACTCGGAACCAGCCACAG

CCATGGCCACCAGGGGAAGA

IL-1β

TGCGTGTTGAAAGATGATAAGCCCA

CAAATCGCTTTTCCATCTTCTTCTTTG

IL-1R

GGAAGGGATGACTACGTTGGGGA

CCAGCCAGCTGAAGCCTGATGTT

IL-6

GAGGCACTGGCAGAAAACAACC

CCTCAAACTCCAAAAGACCAGTGATG

IL-6R

CCAGGAGGAGTTCGGGCAAG

GGGGTGGACACCTCGTTCTCA

  1. Abbreviations: RT-PCR real-time reverse transcriptase-polymerase chain reaction, RPLP0 large ribosomal protein P0, GAPDH glyceraldehyde-3-phosphate dehydrogenase, IGF insulin-like growth factor, HGF hepatocyte growth factor, MCP1 monocyte chemoattractant protein = CCL2, COX cyclooxygenase, HSP heat shock protein, MuRF1 muscle ring finger protein 1, TNF tumor necrosis factor, IL interleukin, R receptor
  2. The HGF primers are specific for the two largest splice variants including the SP domain